{6} All Tickets By Milestone (Including closed) (266 matches)

A more complex example to show how to make advanced reports.

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(empty) (11 matches)

Ticket Summary Component Status Resolution Version Type Priority Owner Modified
#93 Allow opening two analyses at once. Qt Gui closed fixed defect blocker diane 06/27/2006
#48 Automate win32 installer build other new enhancement minor diane 10/13/2006
#27 Collect example sequences other closed fixed enhancement minor diane 09/12/2006
#88 Find titus' paper on FR versus the bacterial genomes other assigned task major diane 10/13/2006
#113 For some reason on Ali's machine cmake is linking in X11 Qt Gui closed worksforme defect major diane 07/28/2006
#79 It'd be nice if you could annotate by providing fasta files python interface closed fixed blocker diane 06/25/2006
#117 Perhaps our fasta loading file loader could detect if we're being fed an html file. Qt Gui closed fixed defect major diane 08/10/2006
#268 files that lack a new line would make the mupa parser choke Qt Gui new defect major diane 08/02/2007
#220 mussa command line seems to be broken... core new 1.0 defect critical diane 10/25/2006
#90 the arrow keys aren't connected to the scrollbar python interface closed fixed defect critical diane 06/25/2006
#121 the load_mupa function choaks when given something other than a file core closed fixed defect major diane 09/08/2006

Bionic Mussa (19 matches)

#4 Aligned sequence view Qt Gui closed fixed critical diane 06/12/2006
#1 Annotation color mapper core closed fixed critical diane 06/25/2006
#5 Configure a mussa analysis from the Gui Qt Gui closed fixed defect major king 06/25/2006
#2 Connection view core closed fixed task major diane 03/15/2006
#19 I broke the scrollbar too Qt Gui closed fixed defect major diane 06/28/2006
#38 Loading a new analysis while an alignment window was open causes segfault Qt Gui closed fixed defect major diane 03/19/2006
#36 Make zoom widget make sense Qt Gui closed fixed defect major diane 05/28/2006
#14 Motifs need to be creatable and editable from within the GUI Qt Gui closed fixed defect major diane 06/28/2006
#40 MussaAlignedWindow, left sequence position doesn't get initial value set Qt Gui closed fixed minor diane 06/25/2006
#72 Myogenin human mouse rat cow chicken files are odd core closed fixed critical diane 06/25/2006
#41 Selection box jumps slightly to the right of the rubber band Qt Gui closed fixed task minor diane 06/25/2006
#23 The threshold widget was broken too Qt Gui closed fixed defect major diane 06/28/2006
#32 The trac pages should become the main mussa website other closed fixed task major king 03/17/2006
#3 View descriptions Qt Gui closed fixed defect major diane 06/25/2006
#25 broke motif colors Qt Gui closed fixed defect major diane 06/28/2006
#16 figure out how to get selections to work with new segment based drawing Qt Gui closed fixed defect major diane 06/28/2006
#12 modify motifs attached to an analysis Qt Gui closed fixed task major diane 06/28/2006
#45 recreate os x bless script Qt Gui closed fixed task major diane 05/30/2006
#42 when resizing you should see more basepairs, not make them bigger. Qt Gui closed fixed defect minor diane 06/25/2006

Few Small Repairs (70 matches)

#119 Add dependencies to MussaglBuild page other closed fixed task major diane 09/12/2006
#43 After scrolling a sequence browser window, selection boxes break Qt Gui closed fixed defect minor diane 06/25/2006
#62 Aligning sequence that has a reverse compliment doesn't fully align correctly Qt Gui closed fixed defect blocker diane 06/25/2006
#92 Allow one to temporarily disable a motif core closed fixed defect blocker diane 06/29/2006
#71 AnnotationColors don't always color motifs correctly Qt Gui closed worksforme defect critical diane 06/29/2006
#95 Annotations masked out when motif defined and then undefined. Qt Gui closed fixed defect minor diane 06/29/2006
#24 Clean up the signals and slots Qt Gui closed fixed defect minor diane 06/28/2006
#44 Computation of reverse compliment colors is buggy Qt Gui closed fixed critical diane 06/25/2006
#53 Copy an example into the os x dmg other closed fixed trivial diane 06/25/2006
#51 Copying sequence might be useful Qt Gui closed fixed enhancement major diane 06/28/2006
#151 Crash is possible when creating a subanalysis smaller than the window Qt Gui closed fixed defect major diane 10/13/2006
#57 Define analysis is annoying Qt Gui closed fixed critical diane 06/25/2006
#56 Define analysis should include scroll area when SequenceWidget count >= 3 Qt Gui closed fixed defect minor king 08/02/2006
#139 Edit motif window looses motif information when closed Qt Gui closed fixed defect major diane 10/10/2006
#150 Example data for 1.0 release Qt Gui closed fixed task major diane 10/13/2006
#126 Figure out how to get the spirit parsers to report parse errors core closed fixed defect major diane 10/11/2006
#149 Handle " in motif names Qt Gui closed fixed defect trivial diane 10/11/2006
#97 Help > Mussa Manual... should have warning dialog upon error Qt Gui closed fixed defect minor king 06/12/2006
#144 IUPAC codes are destroyed by the sequence normalization code Qt Gui closed fixed defect critical diane 10/10/2006
#142 It'd be really useful to trigger a subanalysis from an aligned sequence view. Qt Gui closed fixed enhancement major diane 10/03/2006
#140 Load Motifs doesn't do anything Qt Gui closed fixed defect major diane 10/03/2006
#104 Loading a different analysis while a MussaAlignedWindow was open caused a crash Qt Gui closed fixed defect major diane 06/15/2006
#114 Location analyses are saved to is ill-defined on OS X. Qt Gui closed fixed defect major diane 09/12/2006
#132 Make open saved analysis open a new window Qt Gui closed duplicate enhancement major diane 09/15/2006
#122 Motif editor needs to support more than 10 motifs Qt Gui closed fixed enhancement critical diane 09/28/2006
#107 Motifs don't show up on the Mussa Aligned Sequence window anymore. Qt Gui closed worksforme defect critical diane 09/12/2006
#103 Motifs need a name field Qt Gui closed fixed enhancement minor diane 10/05/2006
#83 Mussa should complain about misformatted fasta files instead of crashing. core closed fixed defect critical diane 06/25/2006
#70 Need to be able to save screenshots in View Alignment Page Qt Gui closed fixed major diane 06/25/2006
#64 Occasionally ConservedPath crashes Qt Gui closed fixed minor diane 06/25/2006
#74 On OSX when maxmizing the sidebar stays on the GL canvas Qt Gui closed fixed defect trivial diane 06/25/2006
#101 On windows, the file browse button doesn't remember the previous path Qt Gui closed fixed enhancement major diane 09/12/2006
#99 Percent threshold shouldn't be editable. Qt Gui closed fixed enhancement blocker diane 06/12/2006
#73 Performance problems doing analysis Qt Gui closed invalid defect major diane 09/13/2006
#116 Perhaps the motif file should have a name field. core closed fixed enhancement major diane 09/13/2006
#86 Progresss bar Qt Gui closed fixed defect major diane 08/23/2006
#49 QAssistant Mussa Docs core closed fixed defect critical diane 10/13/2006
#76 Qt 4.1.1 crashes on barbara's computer Qt Gui closed invalid defect trivial diane 06/25/2006
#78 Reverse compliment alignment lines dont seem to match up core closed fixed critical diane 06/25/2006
#110 Running a subanalysis with nothing loaded causes the program to crash Qt Gui closed fixed defect major diane 07/06/2006
#130 Save is relative to the current directory Qt Gui closed fixed defect major diane 09/15/2006
#96 Save to image broken Qt Gui closed fixed defect minor king 10/13/2006
#52 Saved analysis needs to keep widow size and threshold for threshold widget Qt Gui closed fixed defect minor diane 06/28/2006
#138 Sequence view window needs a title Qt Gui closed fixed defect major diane 10/03/2006
#133 Should be able to save motifs core closed fixed enhancement critical diane 10/12/2006
#55 Somehow when reloading an analysis it needs to save threshold / window size Qt Gui closed fixed defect critical diane 06/25/2006
#147 Sometimes the width of a quadrallateral is too small Qt Gui closed fixed defect trivial diane 10/10/2006
#26 SubAnalysis mode Qt Gui closed fixed enhancement critical diane 06/30/2006
#109 Subanalysis sequence list wasn't being cleared Qt Gui closed fixed defect major diane 07/06/2006
#129 Subseq doesn't support trees correctly Qt Gui closed fixed defect major diane 09/15/2006
#50 Switch to using Qt4.1 resources (automatically compiles resources into binary). Qt Gui closed fixed defect minor diane 06/25/2006
#66 The annotation for myogenin needs to be checked. Qt Gui closed fixed major diane 06/25/2006
#115 The create an analysis screen create the sequences in the reverse order. Qt Gui closed fixed defect minor diane 08/10/2006
#75 The scrollbar navigation when zoomed in jumps too far Qt Gui closed fixed defect critical diane 08/10/2006
#127 The sidebar layout isn't right after loading a second analysis into the same window Qt Gui closed fixed defect major diane 09/14/2006
#68 The web site should have the Caltech and possibly BMNC logo Qt Gui closed fixed major king 06/25/2006
#31 Threshold Widget should use spinboxes Qt Gui closed fixed major diane 06/25/2006
#20 Toggle Motif Button Implementation Qt Gui closed fixed defect minor king 07/01/2006
#118 Tracks need an edit properites option. Qt Gui closed fixed enhancement major diane 08/23/2006
#15 Unify build system core closed fixed defect major diane 06/28/2006
#34 Unused variable 'max_range' in 'void ScrollableSequenceBrowser::updateScrollBar()' Qt Gui closed fixed defect minor diane 06/25/2006
#102 Update "blocking the gui" comment in --no-gui mode. core closed wontfix enhancement trivial diane 06/28/2006
#131 When closing an analysis window, cancel doesn't prevent the close Qt Gui closed worksforme defect major diane 10/13/2006
#134 Width of seqcomp match line is wrong Qt Gui closed fixed defect blocker diane 10/10/2006
#146 Win32: Create new analysis mystery crash Qt Gui closed fixed defect blocker king 10/10/2006
#135 Win32: Save as not working... causes crash. Qt Gui closed fixed defect critical king 09/25/2006
#120 Windows doesn't have python installed by default Qt Gui closed fixed enhancement major diane 10/12/2006
#35 Zoom Icon Qt Gui closed fixed minor diane 06/25/2006
#143 add command line option to annotate an analysis with a motif file. Qt Gui closed fixed enhancement major diane 10/04/2006
#125 autodetect if python needs -lutil Qt Gui closed fixed defect major diane 09/18/2006
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