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Mussa
Multi-Species Sequence Analysis
We be plundering the High Sequence Seas For the hidden Treasures of Conservation
About Mussa
Mussa is an N-way version of the FamilyRelations (which is a part of the Cartwheel project) 2-way comparative sequence analysis software. Given DNA sequence from N species, Mussa uses all possible pairwise comparions to derive an N-wise comparison. For example, given sequences 1,2,3, and 4, Mussa makes 6 2-way comparisons: 1vs2, 1vs3, 1vs4, 2vs3, 2vs4, and 3vs4. It then compares all the links between these comparisons, saving those that satisfy a transitivity requirement. The saved paths are then displayed in an interactive viewer.
Download
Stable Releases:
| Application | Version | License | Linux (Binary) | Mac OS X (Binary) | Windows XP (Binary) | Source | Version Control |
| Mussagl | 1.0.0 | GPL v2 | N/A | Available later today | Win32 Installer | See Version Control | darcs |
| Mussagl | development builds | GPL v2 | See development builds below | See development builds above | See development builds above | See Version Control | darcs |
Contact
If you would like to contact us about Mussagl, feel free to e-mail one or both of us:
- Diane Trout <diane (at) caltech.edu>
- Brandon King <kingb (at) caltech.edu>
Documentation
- Mussagl User Guide
- Mussagl Video Tutorials - Work in Progress
- Example Data
- Developement Roadmap
- Checking out Mussagl from Revision Control
- Recent Mussagl Changes in Revision Control
- Building Mussagl from Source
Feature Requests / Bugs
Older Mussa Versions
- Mussa - C++/FLTK Version
- Mussa Prototype (Retired) - Python/PMW Version
Development Credits
- Mussagl: Diane Trout with assitance from Brandon King (Core algorithms retained from Mussa (C++/FLTK) )
- C++/FLTK conversion: Tristan De Buysscher with assistance from Titus Brown
- Python/PMW prototype: Tristan De Buysscher & Nora Mullaney
- Consulting User: Erich Schwarz
- Principal Investigators: Barbara Wold, Paul Sternberg
Attachments (1)
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mussagl_animation.gif
(168.5 KB
) - added by 18 years ago.
Mussagl in action.
Download all attachments as: .zip
