= MussaGL 1.1.0 = == Highlight of New Features == * N's in sequence are drawing in a light gray * Now you can see where N's exist in your sequence. * Scrollable main window * Allows for scrolling when the number of sequences is greater than the available drawing space. * Sequence Properties ([485], [488], [489]) * Allows for choosing the location to draw an individual sequence given an offset. * Escape key clears sequence browser selection (#212, [553]) * More meaningful error messages when loading annotations (#239, [515]) * File saving and parsing improvements. == Additional New Features == * Saved analyses now save and load current soft threshold (#257, [557]) * Additional "What's This?" documentation ([518], [519]) * Core sequence code refactored. * Annotation code refactored. * Use of boost::shared_ptr to minimize memory leaks. * Additional unit tests * Added support for paircomp ([503]) * Qt version displayed in about box ([517]) == Bug Fixes == * Sub-analysis failure to draw on init fix (#254, [524]) * Save to image crash fix (#251, [523]) * Loading saved analysis improved (#240, [554] * More accepting of OS acceptable file names (#237, [485]) * Added -fPIC when building on 64-bit machines ([508]) * Motifs are no longer lost after closing motif window (#195, [516]) * General stabilization and other bug fixes. == Release 1.1.0 Tickets == [[TicketQuery(milestone=release_1.1)]]