id Summary Owner Type Priority Component Version 247 Increase version number to 1.1.0 diane task blocker core 250 Cmake build failure: /usr/bin/ld: cannot find -loptimized diane defect blocker Qt Gui 111 Set zero/alignment point for a sequence diane enhancement critical Qt Gui 158 When unable to parse a fasta file report its name diane enhancement critical Qt Gui 182 Mussa views need vertical scrolls diane enhancement critical Qt Gui 195 Disable motif and closing motif editor causes loss of motifs. diane defect critical Qt Gui 1.0 206 We need some way of indicating Ns diane enhancement critical Qt Gui 215 You should be able to paste into the motif editor diane enhancement critical Qt Gui 259 New Annotations hide the sequence when you zoom to sequence view diane defect critical Qt Gui 211 Report how many basepairs are copied diane enhancement major Qt Gui 217 Use QtDesktopServices for openURL diane enhancement major Qt Gui 226 QtTest is now a framework diane defect major other 233 when first displaying mussa the tracks aren't sized to the available viewport on os x diane defect major Qt Gui 236 Error parsing annotation file should also include the filename in the exception. diane enhancement major core 237 Crashing with invalid file name diane defect major Qt Gui 239 Report error when trying to load a directory as an annotation. diane defect major core 244 len(mussa.paths()) returns number of tracks, not the number of paths found diane defect major python interface 246 "Add ""What's this?"" documentation to as many elements of the GUI as possible." king enhancement major Qt Gui 251 Save to image crash king defect major Qt Gui 252 Make scroll wheel work king enhancement major Qt Gui 255 Even telling cmake to use python2.3 mussa still builds against 2.5 diane defect major python interface 256 Assertion failed diane defect major Qt Gui 257 Saving analysis saves at current threshold king defect major Qt Gui 260 Mupa parser is cranky on windows files diane defect major core 265 Mussa annotation file didn't work if the last sequence wasn't terminated by a newline diane defect major core 240 When there are no matches, mussa doesn't seem to display anything king defect minor Qt Gui 254 Sub-analysis failing to draw paths on init king defect minor Qt Gui 261 Mussa mupa comment character required a space diane defect minor core 194 use window feedback to show that there are unsaved changes diane enhancement trivial Qt Gui 1.0 210 see about removing some of the wasted border width on the sidebars diane enhancement trivial Qt Gui 249 darcs tag mussa_1.1.0 diane defect critical Qt Gui 263 Compile warnings must die! diane defect critical Qt Gui 248 Test latest build on all platforms diane task major Qt Gui 266 Sub-analysis drawing bug (see attached screenshots) diane defect major Qt Gui 267 Sequence View soft threshold control non-responsive diane defect major Qt Gui