id Summary Status Owner Priority Milestone Component 30 "Allow ""leave one out"" nway transitive searches" new diane blocker release_1.2 core 81 Storing and searching metadata new diane blocker from __future__ import magic Qt Gui 77 Font needs to be better... new diane critical Standing on our heads Qt Gui 82 Unit test python API new diane critical unit tests Qt Gui 98 QtAssistant needs to be put in the right place on os x. new diane critical Standing on our heads Qt Gui 100 There should be some way to display the annotation name with the annotation track new diane critical Standing on our heads Qt Gui 108 Cancel on the progress bar should do something new diane critical Standing on our heads Qt Gui 7 Reuse seqcomps new diane major Standing on our heads core 8 Per species thresholds new diane major from __future__ import magic core 9 Connect to cartwheel new diane major Standing on our heads Qt Gui 13 AnnotationColor mapper needs a user interface new diane major Standing on our heads Qt Gui 17 Allow user to specify an offset for base pair location label new diane major Standing on our heads Qt Gui 28 Allow user to force a loaded sequence to be reverse complimented. new diane major from __future__ import magic Qt Gui 61 For mac users it'd be useful to make double clicking on a data file actually load mussagl new diane major Standing on our heads Qt Gui 65 It'd be neat if you could select a region and go to ucsc new diane major Standing on our heads Qt Gui 80 Difference between analyses new diane major from __future__ import magic Qt Gui 87 Autodetect threshold new diane major from __future__ import magic Qt Gui 106 Figure out how to test copySelectedTracks new diane major unit tests core 141 Vector output new diane major Standing on our heads Qt Gui 145 Use titus' paircomp and motility new diane major Standing on our heads core 201 Run analyses in worker thread new diane major Standing on our heads core 203 Unit test the code that generates all the mussa filename new diane major unit tests core 204 When you resize a mussa window, resize the drawing too. new diane major Standing on our heads Qt Gui 205 Add button for autofitting sequence to window new diane major release_1.2 Qt Gui 209 Extend the command line parsing to allow fully specifying an analysis new diane major Standing on our heads Qt Gui 218 Qt4.2 has a platform independent way to place Ok/Cancel buttons in dialog new diane major release_1.2 Qt Gui 219 Reordering sequences in an analysis would be really nice new diane major from __future__ import magic Qt Gui 222 Allow hyperlink annotations for CDS to PyMol rendering of protein structure new diane major from __future__ import magic Qt Gui 224 Define a common base class between MussaWindow and MussAlignedWindow new diane major Standing on our heads Qt Gui 228 Allow more vertical collapse of description widgets new diane major release_1.2 Qt Gui 238 Set left offset graphically new diane major from __future__ import magic Qt Gui 241 One of the annotations needed is to show where the start of the gene is new diane major release_1.2 Qt Gui 245 Implement back_inserter for sequence type new diane major from __future__ import magic core 11 create unifed sequence type new diane minor Standing on our heads core 18 segments should indicate if they're both forward and reveresed new diane minor from __future__ import magic core 29 Connect to Core Match new diane minor Standing on our heads core 48 Automate win32 installer build new diane minor other 54 Allow compressing repeat regions new diane minor from __future__ import magic Qt Gui 112 Sequence logo new diane minor from __future__ import magic Qt Gui 123 Allow hiding sidebars new diane minor release_1.2 Qt Gui 124 report patch version new diane minor release_1.2 core 136 allow absolute positioning new diane minor Standing on our heads Qt Gui 155 Include a simple repeat filter new diane minor from __future__ import magic core 230 shipit script should ship source distribution too. new diane minor release_1.2 other 253 Show conserved window on local alignment display new diane minor Standing on our heads Qt Gui 89 Blast to find mussa regions new diane trivial Standing on our heads core 193 Changing a species name doesn't set dirty flag. new diane trivial release_1.2 Qt Gui