| #81 |
Storing and searching metadata
|
new
|
diane
|
enhancement
|
blocker
|
from __future__ import magic
|
| #77 |
Font needs to be better...
|
new
|
diane
|
enhancement
|
critical
|
Standing on our heads
|
| #82 |
Unit test python API
|
new
|
diane
|
enhancement
|
critical
|
unit tests
|
| #98 |
QtAssistant needs to be put in the right place on os x.
|
new
|
diane
|
enhancement
|
critical
|
Standing on our heads
|
| #100 |
There should be some way to display the annotation name with the annotation track
|
new
|
diane
|
enhancement
|
critical
|
Standing on our heads
|
| #108 |
Cancel on the progress bar should do something
|
new
|
diane
|
enhancement
|
critical
|
Standing on our heads
|
| #249 |
darcs tag mussa_1.1.0
|
new
|
diane
|
defect
|
critical
|
release_1.1
|
| #263 |
Compile warnings must die!
|
new
|
diane
|
defect
|
critical
|
release_1.1
|
| #9 |
Connect to cartwheel
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #13 |
AnnotationColor mapper needs a user interface
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #17 |
Allow user to specify an offset for base pair location label
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #28 |
Allow user to force a loaded sequence to be reverse complimented.
|
new
|
diane
|
enhancement
|
major
|
from __future__ import magic
|
| #61 |
For mac users it'd be useful to make double clicking on a data file actually load mussagl
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #65 |
It'd be neat if you could select a region and go to ucsc
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #80 |
Difference between analyses
|
new
|
diane
|
enhancement
|
major
|
from __future__ import magic
|
| #87 |
Autodetect threshold
|
new
|
diane
|
enhancement
|
major
|
from __future__ import magic
|
| #141 |
Vector output
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #198 |
Document the multi add to sub-analysis feature.
|
new
|
king
|
task
|
major
|
document_1.1
|
| #202 |
Investigate SIP instead of boost::python
|
new
|
king
|
task
|
major
|
Standing on our heads
|
| #204 |
When you resize a mussa window, resize the drawing too.
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #205 |
Add button for autofitting sequence to window
|
new
|
diane
|
enhancement
|
major
|
release_1.2
|
| #209 |
Extend the command line parsing to allow fully specifying an analysis
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #218 |
Qt4.2 has a platform independent way to place Ok/Cancel buttons in dialog
|
new
|
diane
|
enhancement
|
major
|
release_1.2
|
| #219 |
Reordering sequences in an analysis would be really nice
|
new
|
diane
|
enhancement
|
major
|
from __future__ import magic
|
| #222 |
Allow hyperlink annotations for CDS to PyMol rendering of protein structure
|
new
|
diane
|
enhancement
|
major
|
from __future__ import magic
|
| #224 |
Define a common base class between MussaWindow and MussAlignedWindow
|
new
|
diane
|
enhancement
|
major
|
Standing on our heads
|
| #228 |
Allow more vertical collapse of description widgets
|
new
|
diane
|
enhancement
|
major
|
release_1.2
|
| #232 |
Document the report bp copied number.
|
new
|
king
|
task
|
major
|
document_1.1
|
| #234 |
Document * in title when there are unsaved changes
|
new
|
king
|
task
|
major
|
document_1.1
|
| #238 |
Set left offset graphically
|
new
|
diane
|
enhancement
|
major
|
from __future__ import magic
|
| #241 |
One of the annotations needed is to show where the start of the gene is
|
new
|
diane
|
enhancement
|
major
|
release_1.2
|
| #242 |
make really sure people understand how repeatmasking prevents motifs from being shown.
|
new
|
diane
|
defect
|
major
|
document_1.1
|
| #248 |
Test latest build on all platforms
|
new
|
diane
|
task
|
major
|
release_1.1
|
| #258 |
document new escape to clear selection
|
new
|
king
|
task
|
major
|
document_1.1
|
| #266 |
Sub-analysis drawing bug (see attached screenshots)
|
new
|
diane
|
defect
|
major
|
release_1.1
|
| #267 |
Sequence View soft threshold control non-responsive
|
new
|
diane
|
defect
|
major
|
release_1.1
|
| #268 |
files that lack a new line would make the mupa parser choke
|
new
|
diane
|
defect
|
major
|
|
| #54 |
Allow compressing repeat regions
|
new
|
diane
|
enhancement
|
minor
|
from __future__ import magic
|
| #112 |
Sequence logo
|
new
|
diane
|
enhancement
|
minor
|
from __future__ import magic
|
| #123 |
Allow hiding sidebars
|
new
|
diane
|
enhancement
|
minor
|
release_1.2
|
| #136 |
allow absolute positioning
|
new
|
diane
|
enhancement
|
minor
|
Standing on our heads
|
| #231 |
Document copy and paste into motif editor now functional.
|
new
|
king
|
task
|
minor
|
document_1.1
|
| #253 |
Show conserved window on local alignment display
|
new
|
diane
|
enhancement
|
minor
|
Standing on our heads
|
| #262 |
ThresholdWidget.reset() SIGNAL/SLOTS issue.
|
new
|
diane
|
defect
|
minor
|
release_1.2
|
| #193 |
Changing a species name doesn't set dirty flag.
|
new
|
diane
|
enhancement
|
trivial
|
release_1.2
|