Opened 17 years ago

Last modified 16 years ago

#11 new enhancement

create unifed sequence type

Reported by: diane Owned by: diane
Priority: minor Milestone: Standing on our heads
Component: core Version:
Keywords: Cc:

Description

There are many different types of things that we attach to a sequence, like seqcomp windows, motifs, annotations, etc. It'd be nice if all of these things shared a common "location" type that understood the start/stop/strand addressing.

I got the idea because I was feeling annoyed that motif searching returned matches for both forward and reverse compliment matches but gave me no indication that they'd done this.

Change History (3)

comment:1 by diane, 16 years ago

Summary: unifed sequence location typecreate unifed sequence type
Type: enhancement

this also takes over for ticket:10 since annotations and sequences will hopefully just be types of sequence, "motifs & annotations" will be integrated.

comment:2 by diane, 16 years ago

Milestone: Standing on our headsrelease_1.1

comment:3 by diane, 16 years ago

Milestone: release_1.1Standing on our heads
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