Custom Query (199 matches)

In addition to the view showing the connections between different seqcomp windows, we also need to show the per base alignment. But [117] is progress.

Need to be able to provide the sequence and parameters needed to run a mussa analysis from the GUI

The old code treated motifis and annotations differently. I think motif searching should generate annotations, which can then use the AnnotationColors color mapper to define what the color for that motif should be.

One might argue that there are usually many more motifs found for a sequence and that'll be too much of a slow down, but I suspect its not going to be a big issue, and the unification of the code paths (and user interface for modifying colors) will be a big win.