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Results (101 - 185 of 185)

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Ticket Summary Owner Type Priority Milestone Component
#211 Report how many basepairs are copied diane enhancement major release_1.1 Qt Gui
#212 ESC key should by bound to 'deselect' current selection. diane enhancement trivial release_1.2 Qt Gui
#213 Document how to deselect tracks/paths king task minor document_1.0 Qt Gui
#215 You should be able to paste into the motif editor diane enhancement critical release_1.1 Qt Gui
#216 subanalysis doesn't call setSoftThreshold to after finishing analysis diane defect major release_1.0 Qt Gui
#217 Use QtDesktopServices for openURL diane enhancement major release_1.1 Qt Gui
#223 Set the Window Icon to be the Mussa icon king enhancement trivial release_1.0 Qt Gui
#225 Document mussagl command line option king task minor document_1.0 Qt Gui
#227 Document Python useage in Mussagl king task major document_1.0 Qt Gui
#233 when first displaying mussa the tracks aren't sized to the available viewport on os x diane defect major release_1.1 Qt Gui
#237 Crashing with invalid file name diane defect major release_1.1 Qt Gui
#240 When there are no matches, mussa doesn't seem to display anything king defect minor release_1.1 Qt Gui
#243 Change mussa track to white boxes with Ns highlighted in black diane enhancement major release_1.2 Qt Gui
#246 Add "What's this?" documentation to as many elements of the GUI as possible. king enhancement major release_1.1 Qt Gui
#250 Cmake build failure: /usr/bin/ld: cannot find -loptimized diane defect blocker release_1.1 Qt Gui
#251 Save to image crash king defect major release_1.1 Qt Gui
#252 Make scroll wheel work king enhancement major release_1.1 Qt Gui
#254 Sub-analysis failing to draw paths on init king defect minor release_1.1 Qt Gui
#256 Assertion failed diane defect major release_1.1 Qt Gui
#257 Saving analysis saves at current threshold king defect major release_1.1 Qt Gui
#259 New Annotations hide the sequence when you zoom to sequence view diane defect critical release_1.1 Qt Gui
#1 Annotation color mapper diane critical Bionic Mussa core
#2 Connection view diane task major Bionic Mussa core
#15 Unify build system diane defect major Few Small Repairs core
#49 QAssistant Mussa Docs diane defect critical Few Small Repairs core
#60 sequence alignment view needs zoom diane defect trivial Few Small Repairs core
#72 Myogenin human mouse rat cow chicken files are odd diane critical Bionic Mussa core
#78 Reverse compliment alignment lines dont seem to match up diane critical Few Small Repairs core
#83 Mussa should complain about misformatted fasta files instead of crashing. diane defect critical Few Small Repairs core
#85 mussagl quits, just like i will AGAIN soon. diane defect critical Few Small Repairs core
#92 Allow one to temporarily disable a motif diane defect blocker Few Small Repairs core
#116 Perhaps the motif file should have a name field. diane enhancement major Few Small Repairs core
#121 the load_mupa function choaks when given something other than a file diane defect major core
#126 Figure out how to get the spirit parsers to report parse errors diane defect major Few Small Repairs core
#133 Should be able to save motifs diane enhancement critical Few Small Repairs core
#183 Seqcomp is case sensitive diane defect major release_1.0 core
#208 the alg unittest executable needs to be broken up diane enhancement major unit tests core
#236 Error parsing annotation file should also include the filename in the exception. diane enhancement major release_1.1 core
#239 Report error when trying to load a directory as an annotation. diane defect major release_1.1 core
#247 Increase version number to 1.1.0 diane task blocker release_1.1 core
#260 Mupa parser is cranky on windows files diane defect major release_1.1 core
#261 Mussa mupa comment character required a space diane defect minor release_1.1 core
#265 Mussa annotation file didn't work if the last sequence wasn't terminated by a newline diane defect major release_1.1 core
#27 Collect example sequences diane enhancement minor other
#32 The trac pages should become the main mussa website king task major Bionic Mussa other
#53 Copy an example into the os x dmg diane trivial Few Small Repairs other
#119 Add dependencies to MussaglBuild page diane task major Few Small Repairs other
#137 Document why Base pair match lines on the sequence view don't always connect all the sequences diane task trivial document_1.0 other
#152 Update mussa_manual.adp to latest tutorial version king task minor document_1.0 other
#157 Mussa manual: document 'save to image' feature king task major document_1.0 other
#161 Add link to smn1 example data (since the UCSC tutorial is based on it) king task major document_1.0 other
#162 Mussa manual: Update major new features section king task minor document_1.0 other
#164 Include a section on creating a .mupa file using the smn1 data. king task major document_1.0 other
#166 Update Mussa summary screenshot to latest version king task major document_1.0 other
#167 Add an "Understanding Mussa" section to manual. king task major document_1.0 other
#168 Mussa manual: Update Mac OS X install instructions king task major document_1.0 other
#169 Update "New Analysis" section as the Dialog box has changed. king task major document_1.0 other
#170 After implementing ticket:164, update 'Load Mupa' section to link to SMN1 example .mupa. king task major document_1.0 other
#171 Remove the "Motif Toggle" button from manual. king defect major document_1.0 other
#172 Update "Dynamic Threshold" section as the widget has changed. king enhancement major document_1.0 other
#173 Update "Sequence Information Bar" section, as it has changed in latest version. king enhancement minor document_1.0 other
#174 Confirm file formats are documented and correct. diane task major document_1.0 other
#175 Document new 'save motifs' feature. king task major document_1.0 other
#176 Document 'Save Analysis' and 'Save Analysis As' features. king task major document_1.0 other
#177 Confirm description of blue conservation tracks is correct. diane task minor document_1.0 other
#178 Update all screenshots to latest version of Mussa. king task major document_1.0 other
#179 Add a section on "File > New Mussa Window" feature. king task major document_1.0 other
#180 shipit script on os x needs to validate the archive diane defect major release_1.0 other
#181 Update 'Load a mussa parameter file' section king task major document_1.0 other
#184 Dont link against X11 on OS X diane defect major release_1.0 other
#185 Update "Load an analysis" section (text/screenshots) king task major document_1.0 other
#189 Document "save on close" section after close of ticket:187 king task major document_1.0 other
#190 Update 'save motifs' section after close of ticket #188. king task minor document_1.0 other
#191 Update "Motif Dialog" section king enhancement major document_1.0 other
#196 Motif editor: document how to delete a motif king enhancement major document_1.0 other
#214 Document why sub-analysis exists king enhancement minor document_1.0 other
#226 QtTest is now a framework diane defect major release_1.1 other
#229 Package Everything for 1.0 diane task major release_1.0 other
#235 set version to 1.0 in version.h diane task major release_1.0 other
#79 It'd be nice if you could annotate by providing fasta files diane blocker python interface
#90 the arrow keys aren't connected to the scrollbar diane defect critical python interface
#244 len(mussa.paths()) returns number of tracks, not the number of paths found diane defect major release_1.1 python interface
#255 Even telling cmake to use python2.3 mussa still builds against 2.5 diane defect major release_1.1 python interface
#37 Skateboard Shoes diane defect
#47 OS X OpenGL rendering problems diane defect
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