Timeline



10/02/2006:

14:56 Ticket #142 (It'd be really useful to trigger a subanalysis from an aligned ...) created by diane
14:55 Ticket #141 (Vector output) created by diane
It'd be really nice if we could generate vector output, both for …
14:54 Ticket #140 (Load Motifs doesn't do anything) created by diane
It appears that the Load Motif menu option either doesn't load motifs …
14:46 Ticket #139 (Edit motif window looses motif information when closed) created by diane
It really should reload the motif information from the analysis when …

09/29/2006:

13:46 Ticket #138 (Sequence view window needs a title) created by diane

09/28/2006:

18:05 Ticket #122 (Motif editor needs to support more than 10 motifs) closed by diane
fixed

09/27/2006:

17:38 Ticket #137 (Document why Base pair match lines on the sequence view don't always ...) created by diane
in cases where there's a match between the first and second sequence …
00:22 Ticket #136 (allow absolute positioning) created by diane
I think i can allow absolute positioning if I made the "location" base …

09/25/2006:

10:14 Ticket #135 (Win32: Save as not working... causes crash.) closed by king
fixed: Fixed in changeset:381. boost::filesystem needed to be told to use …

09/22/2006:

16:30 Ticket #135 (Win32: Save as not working... causes crash.) created by king
On windows the Save As feature causes a crash.

09/21/2006:

14:26 Ticket #134 (Width of seqcomp match line is wrong) created by diane
It might be useful if the seqcomp match lines being drawn were …
13:23 OSXUniversalDependencies edited by diane
(diff)

09/19/2006:

16:49 Ticket #133 (Should be able to save motifs) created by diane
It looks like the best path is that when saving an analysis it'll also …

09/18/2006:

16:24 Ticket #125 (autodetect if python needs -lutil) closed by diane
fixed: Fixed with [375] and [376] Pretty nice of distutils to provide a way …

09/15/2006:

17:14 Ticket #105 (Load Analysis should spawn a new window) closed by diane
fixed: Technically the create from mupa file should open a new window too, …
17:09 Ticket #132 (Make open saved analysis open a new window) closed by diane
duplicate: duplicate of ticket:105
17:02 Ticket #132 (Make open saved analysis open a new window) created by diane
I can make open saved analysis open a new window if the window isn't …
15:55 Ticket #131 (When closing an analysis window, cancel doesn't prevent the close) created by diane
Brandon tried to close a subanalysis window that hadn't been saved. It …
15:34 Ticket #130 (Save is relative to the current directory) closed by diane
fixed: implemented [370] though I started [372] because I forgot that I'd …
11:52 Ticket #130 (Save is relative to the current directory) created by diane
Mussa doesn't save the path it was loaded from, so when save a …
11:11 Ticket #129 (Subseq doesn't support trees correctly) closed by diane
fixed: Implemented [367]

09/14/2006:

17:47 Ticket #129 (Subseq doesn't support trees correctly) created by diane
Currently subseq's start/count is always relative to the seq_string, …
14:12 Ticket #127 (The sidebar layout isn't right after loading a second analysis into ...) closed by diane
fixed: fixed in [363]
13:12 Ticket #128 (the editable sequence name only shows the end of long names.) closed by diane
fixed: fixed [362] ( I think I spent more time on bug tracking than bug …
13:06 Ticket #128 (the editable sequence name only shows the end of long names.) created by diane
Not terribly important but a long name like "tetraodon" only shows the …
13:05 Ticket #127 (The sidebar layout isn't right after loading a second analysis into ...) created by diane
The layout doesn't put the first description block at the very top …

09/13/2006:

18:38 Ticket #126 (Figure out how to get the spirit parsers to report parse errors) created by diane
The annotation parser and the motif parser are now both using the …
18:36 Ticket #116 (Perhaps the motif file should have a name field.) closed by diane
fixed: implmented in [361] with the caveat that my spirit parsers don't throw …
15:52 Ticket #73 (Performance problems doing analysis) closed by diane
invalid: This ticket was mostly gathering information about what influences …
15:36 Ticket #125 (autodetect if python needs -lutil) created by diane
On Fedora core the version of python requires being linked with …
15:35 Ticket #124 (report patch version) created by diane
Brandon suggested that it'd be useful for mussa to have some version …
15:33 Ticket #123 (Allow hiding sidebars) created by diane
Tristan complained briefly about the sidebars taking up too much …

09/12/2006:

18:21 Ticket #101 (On windows, the file browse button doesn't remember the previous path) closed by diane
fixed: Actually this applied to the os x (and probably linux) versions as …
17:31 Ticket #122 (Motif editor needs to support more than 10 motifs) created by diane
I really should be using one of the Qt MVC classes to let the number …
17:13 Ticket #107 (Motifs don't show up on the Mussa Aligned Sequence window anymore.) closed by diane
worksforme: I'm going to pretend this is working at the moment. If someone …
17:11 Ticket #27 (Collect example sequences) closed by diane
fixed: i've got lots of example sequence now... I don't think this is …
17:10 Ticket #114 (Location analyses are saved to is ill-defined on OS X.) closed by diane
fixed: [358] sets the default save as directory to the users home directory, …
16:57 Ticket #119 (Add dependencies to MussaglBuild page) closed by diane
fixed: I think I've added the current set of dependencies.

09/11/2006:

17:45 MussaglBuild edited by diane
notes about python dependency. (diff)
17:43 MussaglBuild edited by diane
(diff)
17:42 MussaglBuild edited by diane
really we need cmake 2.4 (diff)

09/08/2006:

22:13 Ticket #121 (the load_mupa function choaks when given something other than a file) closed by diane
fixed: Fixed in [352]
17:01 Ticket #121 (the load_mupa function choaks when given something other than a file) created by diane
The load_mussa code hangs when you run mussa --run <directoy name>.
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