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Results (101 - 199 of 199)

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Ticket Summary Owner Type Priority Milestone Component
#49 QAssistant Mussa Docs diane defect critical Few Small Repairs core
#200 Pushing the threshold change button too fast will cause mussa to crash diane defect major release_1.0 Qt Gui
#86 Progresss bar diane defect major Few Small Repairs Qt Gui
#116 Perhaps the motif file should have a name field. diane enhancement major Few Small Repairs core
#117 Perhaps our fasta loading file loader could detect if we're being fed an html file. diane defect major Qt Gui
#73 Performance problems doing analysis diane defect major Few Small Repairs Qt Gui
#99 Percent threshold shouldn't be editable. diane enhancement blocker Few Small Repairs Qt Gui
#229 Package Everything for 1.0 diane task major release_1.0 other
#101 On windows, the file browse button doesn't remember the previous path diane enhancement major Few Small Repairs Qt Gui
#74 On OSX when maxmizing the sidebar stays on the GL canvas diane defect trivial Few Small Repairs Qt Gui
#64 Occasionally ConservedPath crashes diane minor Few Small Repairs Qt Gui
#47 OS X OpenGL rendering problems diane defect
#259 New Annotations hide the sequence when you zoom to sequence view diane defect critical release_1.1 Qt Gui
#70 Need to be able to save screenshots in View Alignment Page diane major Few Small Repairs Qt Gui
#72 Myogenin human mouse rat cow chicken files are odd diane critical Bionic Mussa core
#40 MussaAlignedWindow, left sequence position doesn't get initial value set diane minor Bionic Mussa Qt Gui
#182 Mussa views need vertical scrolls diane enhancement critical release_1.1 Qt Gui
#83 Mussa should complain about misformatted fasta files instead of crashing. diane defect critical Few Small Repairs core
#261 Mussa mupa comment character required a space diane defect minor release_1.1 core
#157 Mussa manual: document 'save to image' feature king task major document_1.0 other
#162 Mussa manual: Update major new features section king task minor document_1.0 other
#168 Mussa manual: Update Mac OS X install instructions king task major document_1.0 other
#156 Mussa manual - meta ticket king task major document_1.0 other
#265 Mussa annotation file didn't work if the last sequence wasn't terminated by a newline diane defect major release_1.1 core
#260 Mupa parser is cranky on windows files diane defect major release_1.1 core
#14 Motifs need to be creatable and editable from within the GUI diane defect major Bionic Mussa Qt Gui
#103 Motifs need a name field diane enhancement minor Few Small Repairs Qt Gui
#107 Motifs don't show up on the Mussa Aligned Sequence window anymore. diane defect critical Few Small Repairs Qt Gui
#163 Motif loading doesn't work with release builds diane defect major release_1.0 Qt Gui
#196 Motif editor: document how to delete a motif king enhancement major document_1.0 other
#122 Motif editor needs to support more than 10 motifs diane enhancement critical Few Small Repairs Qt Gui
#186 Motif dialog on load existing motifs behavior needs update. diane enhancement minor release_1.0 Qt Gui
#36 Make zoom widget make sense diane defect major Bionic Mussa Qt Gui
#252 Make scroll wheel work king enhancement major release_1.1 Qt Gui
#132 Make open saved analysis open a new window diane enhancement major Few Small Repairs Qt Gui
#114 Location analyses are saved to is ill-defined on OS X. diane defect major Few Small Repairs Qt Gui
#38 Loading a new analysis while an alignment window was open causes segfault diane defect major Bionic Mussa Qt Gui
#104 Loading a different analysis while a MussaAlignedWindow was open caused a crash diane defect major Few Small Repairs Qt Gui
#140 Load Motifs doesn't do anything diane defect major Few Small Repairs Qt Gui
#105 Load Analysis should spawn a new window diane defect minor Standing on our heads Qt Gui
#142 It'd be really useful to trigger a subanalysis from an aligned sequence view. diane enhancement major Few Small Repairs Qt Gui
#79 It'd be nice if you could annotate by providing fasta files diane blocker python interface
#10 Integrate motifs with annotations diane defect major Standing on our heads core
#247 Increase version number to 1.1.0 diane task blocker release_1.1 core
#164 Include a section on creating a .mupa file using the smn1 data. king task major document_1.0 other
#144 IUPAC codes are destroyed by the sequence normalization code diane defect critical Few Small Repairs Qt Gui
#19 I broke the scrollbar too diane defect major Bionic Mussa Qt Gui
#97 Help > Mussa Manual... should have warning dialog upon error king defect minor Few Small Repairs Qt Gui
#149 Handle " in motif names diane defect trivial Few Small Repairs Qt Gui
#113 For some reason on Ali's machine cmake is linking in X11 diane defect major Qt Gui
#126 Figure out how to get the spirit parsers to report parse errors diane defect major Few Small Repairs core
#150 Example data for 1.0 release diane task major Few Small Repairs Qt Gui
#255 Even telling cmake to use python2.3 mussa still builds against 2.5 diane defect major release_1.1 python interface
#236 Error parsing annotation file should also include the filename in the exception. diane enhancement major release_1.1 core
#187 Editing a motif does not set dirty flag. diane defect minor release_1.0 Qt Gui
#139 Edit motif window looses motif information when closed diane defect major Few Small Repairs Qt Gui
#212 ESC key should by bound to 'deselect' current selection. diane enhancement trivial release_1.2 Qt Gui
#184 Dont link against X11 on OS X diane defect major release_1.0 other
#214 Document why sub-analysis exists king enhancement minor document_1.0 other
#137 Document why Base pair match lines on the sequence view don't always connect all the sequences diane task trivial document_1.0 other
#175 Document new 'save motifs' feature. king task major document_1.0 other
#225 Document mussagl command line option king task minor document_1.0 Qt Gui
#213 Document how to deselect tracks/paths king task minor document_1.0 Qt Gui
#227 Document Python useage in Mussagl king task major document_1.0 Qt Gui
#176 Document 'Save Analysis' and 'Save Analysis As' features. king task major document_1.0 other
#189 Document "save on close" section after close of ticket:187 king task major document_1.0 other
#195 Disable motif and closing motif editor causes loss of motifs. diane defect critical release_1.1 Qt Gui
#56 Define analysis should include scroll area when SequenceWidget count >= 3 king defect minor Few Small Repairs Qt Gui
#57 Define analysis is annoying diane critical Few Small Repairs Qt Gui
#237 Crashing with invalid file name diane defect major release_1.1 Qt Gui
#151 Crash is possible when creating a subanalysis smaller than the window diane defect major Few Small Repairs Qt Gui
#51 Copying sequence might be useful diane enhancement major Few Small Repairs Qt Gui
#53 Copy an example into the os x dmg diane trivial Few Small Repairs other
#2 Connection view diane task major Bionic Mussa core
#174 Confirm file formats are documented and correct. diane task major document_1.0 other
#177 Confirm description of blue conservation tracks is correct. diane task minor document_1.0 other
#5 Configure a mussa analysis from the Gui king defect major Bionic Mussa Qt Gui
#44 Computation of reverse compliment colors is buggy diane critical Few Small Repairs Qt Gui
#27 Collect example sequences diane enhancement minor other
#250 Cmake build failure: /usr/bin/ld: cannot find -loptimized diane defect blocker release_1.1 Qt Gui
#24 Clean up the signals and slots diane defect minor Few Small Repairs Qt Gui
#243 Change mussa track to white boxes with Ns highlighted in black diane enhancement major release_1.2 Qt Gui
#256 Assertion failed diane defect major release_1.1 Qt Gui
#95 Annotations masked out when motif defined and then undefined. diane defect minor Few Small Repairs Qt Gui
#71 AnnotationColors don't always color motifs correctly diane defect critical Few Small Repairs Qt Gui
#1 Annotation color mapper diane critical Bionic Mussa core
#153 Allow users to specify the file load file mask king task trivial document_1.0 Qt Gui
#93 Allow opening two analyses at once. diane defect blocker Qt Gui
#92 Allow one to temporarily disable a motif diane defect blocker Few Small Repairs core
#62 Aligning sequence that has a reverse compliment doesn't fully align correctly diane defect blocker Few Small Repairs Qt Gui
#4 Aligned sequence view diane critical Bionic Mussa Qt Gui
#43 After scrolling a sequence browser window, selection boxes break diane defect minor Few Small Repairs Qt Gui
#170 After implementing ticket:164, update 'Load Mupa' section to link to SMN1 example .mupa. king task major document_1.0 other
#199 After [451] I noticed that subanalyses didn't seem to have motif information diane defect major release_1.0 Qt Gui
#161 Add link to smn1 example data (since the UCSC tutorial is based on it) king task major document_1.0 other
#119 Add dependencies to MussaglBuild page diane task major Few Small Repairs other
#167 Add an "Understanding Mussa" section to manual. king task major document_1.0 other
#179 Add a section on "File > New Mussa Window" feature. king task major document_1.0 other
#246 Add "What's this?" documentation to as many elements of the GUI as possible. king enhancement major release_1.1 Qt Gui
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